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  5. GRMZM2G031308

GRMZM2G031308


Description : VIRB2-interacting protein 1


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G031308
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Bradi1g58190 No alias Reticulon family protein 0.02 Orthogroups_2024-Update
Brara.A03496.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Brara.E03028.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Glyma.05G212800 No alias VIRB2-interacting protein 2 0.04 Orthogroups_2024-Update
Glyma.08G019300 No alias VIRB2-interacting protein 2 0.05 Orthogroups_2024-Update
Glyma.14G031900 No alias Reticulon family protein 0.02 Orthogroups_2024-Update
Glyma.16G030700 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Mp6g03260.1 No alias ER-associated protein (Reticulon) 0.02 Orthogroups_2024-Update
PSME_00019330-RA No alias (at4g11220 : 250.0) VIRB2-interacting protein 2 (BTI2);... 0.03 Orthogroups_2024-Update
PSME_00023278-RA No alias (at3g54120 : 149.0) Reticulon family protein; FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00042713-RA No alias (at3g10915 : 156.0) Reticulon family protein; INVOLVED... 0.04 Orthogroups_2024-Update
Seita.4G162900.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.04 Orthogroups_2024-Update
Seita.5G279000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.01 Orthogroups_2024-Update
Seita.5G309800.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.04 Orthogroups_2024-Update
Sopen08g030030 No alias Reticulon 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 73 227
No external refs found!