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  5. GRMZM2G034868

GRMZM2G034868


Description : FRS (FAR1 Related Sequences) transcription factor family


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G034868
Cluster HCCA clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
At2g32250 No alias Protein FAR1-RELATED SEQUENCE 2... 0.03 Orthogroups_2024-Update
Bradi1g24700 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Bradi4g41960 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Bradi5g21820 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Brara.E01132.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.08G227500 No alias FAR1-related sequence 3 0.03 Orthogroups_2024-Update
Glyma.09G019300 No alias FAR1-related sequence 6 0.03 Orthogroups_2024-Update
HORVU5Hr1G010730.2 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G055740.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Potri.014G167000 No alias FAR1-related sequence 10 0.03 Orthogroups_2024-Update
Sobic.002G030400.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G316600.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 295 387
IPR004330 FAR1_DNA_bnd_dom 97 183
No external refs found!