At1g15890

Description : Probable disease resistance protein At1g15890 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMP6]

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g15890
Cluster	HCCA clusters: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
Brara.F00299.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I01920.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Glyma.09G258200	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Glyma.18G280432	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
LOC_Os01g57870	No alias	disease resistance protein RPS2, putative, expressed	0.03	Orthogroups_2024-Update
MA_31961g0010	No alias	(at5g63020 : 182.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
PSME_00011883-RA	No alias	(at4g27220 : 218.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
PSME_00037873-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00045398-RA	No alias	(at1g12280 : 140.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
PSME_00056885-RA	No alias	(at4g27220 : 223.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
Potri.T026800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T045200	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Seita.7G165200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc08g007250	No alias	Disease resistance protein (AHRD V3.3 *** W9RZV6_9ROSA)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006405	RNA export from nucleus	IEP	Predicted GO
BP	GO:0006406	mRNA export from nucleus	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
BP	GO:0043248	proteasome assembly	IEP	Predicted GO
BP	GO:0050657	nucleic acid transport	IEP	Predicted GO
BP	GO:0050658	RNA transport	IEP	Predicted GO
BP	GO:0051028	mRNA transport	IEP	Predicted GO
BP	GO:0051168	nuclear export	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051236	establishment of RNA localization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	159	399
IPR001611	Leu-rich_rpt	535	593

External Links

No external refs found!