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  5. GRMZM2G039477

GRMZM2G039477


Description : Function unknown


Gene families : OG_42_0001280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G039477
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
At5g43150 No alias At5g43150 [Source:UniProtKB/TrEMBL;Acc:Q9FMG8] 0.02 Orthogroups_2024-Update
Seita.9G498200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g068620 No alias Negative regulator of sporulation MDS3 (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!