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GRMZM2G040079


Description : cell division cycle protein 48-related / CDC48-related


Gene families : OG_42_0005707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G040079
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_3497.3 No alias (at1g05910 : 434.0) cell division cycle protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 402 537
IPR001487 Bromodomain 891 962
No external refs found!