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  5. GRMZM2G040911

GRMZM2G040911


Description : Auxin efflux carrier family protein


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G040911
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Bradi2g48170 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Brara.B01244.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.02 Orthogroups_2024-Update
Brara.J01877.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.03 Orthogroups_2024-Update
Brara.J01982.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.05 Orthogroups_2024-Update
Glyma.05G109800 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G111420.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
PSME_00040058-RA No alias (at5g57090 : 363.0) Encodes an auxin efflux carrier that... 0.02 Orthogroups_2024-Update
Potri.004G124200 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Potri.015G038700 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Seita.2G264800.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Sopen02g032410 No alias Membrane transport protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 199 357
IPR004776 Mem_trans 10 175
No external refs found!