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  5. GRMZM2G042089

GRMZM2G042089


Description : clathrin adaptor complexes medium subunit family protein


Gene families : OG_42_0002671 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G042089
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_16326 No alias coatomer subunit delta 0.02 Orthogroups_2024-Update
Pp1s10_163V6 No alias coatomer delta subunit (delta-coat protein) (delta-cop) 0.02 Orthogroups_2024-Update
Sobic.004G270000.3 No alias subunit delta of cargo adaptor F-subcomplex 0.05 Orthogroups_2024-Update
Solyc10g038120 No alias Coatomer subunit delta (AHRD V3.3 *** W9SBM6_9ROSA) 0.03 Orthogroups_2024-Update
evm.model.tig00020610.20 No alias (p49661|copd_orysa : 166.0) Coatomer subunit delta... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006481 C-terminal protein methylation IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0018410 C-terminal protein amino acid modification IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043687 post-translational protein modification IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR028565 MHD 274 496
No external refs found!