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  5. GRMZM2G042118

GRMZM2G042118


Description : glycine-rich RNA-binding protein 2


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G042118
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
81392 No alias glycine-rich RNA-binding protein 3 0.02 Orthogroups_2024-Update
Brara.B02117.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
Brara.K01454.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G172300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Glyma.04G012700 No alias cold, circadian rhythm, and rna binding 2 0.03 Orthogroups_2024-Update
Glyma.05G020900 No alias glycine-rich RNA-binding protein 3 0.04 Orthogroups_2024-Update
Glyma.11G117600 No alias cold, circadian rhythm, and rna binding 2 0.03 Orthogroups_2024-Update
Glyma.11G255000 No alias glycine-rich RNA-binding protein 2 0.04 Orthogroups_2024-Update
Glyma.18G266500 No alias glycine-rich RNA-binding protein 3 0.03 Orthogroups_2024-Update
HORVU3Hr1G093400.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
HORVU4Hr1G059000.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g61990 No alias glycine-rich RNA-binding protein 7, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g31800 No alias glycine-rich RNA-binding protein 7, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00047208-RA No alias (at5g61030 : 152.0) encodes a glycine-rich RNA binding... 0.03 Orthogroups_2024-Update
Pp1s123_58V6 No alias glycine-rich rna-binding protein 2 0.02 Orthogroups_2024-Update
Seita.2G381300.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
Seita.3G357800.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
Seita.5G427300.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
Sobic.001G141300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G366800.1 No alias RNA editing factor *(ORRM3) 0.05 Orthogroups_2024-Update
Sobic.006G073300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G034400.1 No alias RNA editing factor *(ORRM2) 0.03 Orthogroups_2024-Update
Solyc05g053780 No alias RNA binding protein-like protein (AHRD V3.3 *** Q3HVL3_SOLTU) 0.02 Orthogroups_2024-Update
Sopen01g051850 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen05g032250 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update
Sopen07g024600 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update
Sopen09g035220 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0030150 protein import into mitochondrial matrix IEP Predicted GO
CC GO:0030915 Smc5-Smc6 complex IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0032465 regulation of cytokinesis IEP Predicted GO
BP GO:0032954 regulation of cytokinetic process IEP Predicted GO
BP GO:0032955 regulation of division septum assembly IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051302 regulation of cell division IEP Predicted GO
BP GO:0065002 intracellular protein transmembrane transport IEP Predicted GO
BP GO:0070585 protein localization to mitochondrion IEP Predicted GO
BP GO:0071806 protein transmembrane transport IEP Predicted GO
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0106068 SUMO ligase complex IEP Predicted GO
BP GO:1901891 regulation of cell septum assembly IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 39 109
No external refs found!