1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G042198

GRMZM2G042198


Description : CONSTANS-like 9


Gene families : OG_42_0001800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001800_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G042198
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Seita.1G301300.1 No alias BBX class-II transcription factor 0.03 Orthogroups_2024-Update
Seita.2G175000.1 No alias BBX class-II transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G256200.1 No alias BBX class-II transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G123500.1 No alias BBX class-II transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006382 adenosine to inosine editing IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Predicted GO
BP GO:0016553 base conversion or substitution editing IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 46 88
IPR010402 CCT_domain 349 391
No external refs found!