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  5. At1g16420

At1g16420


Description : Metacaspase-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA41]


Gene families : OG_42_0001055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g16420
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Brara.I01197.1 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.02 Orthogroups_2024-Update
GRMZM2G066041 No alias metacaspase 5 0.04 Orthogroups_2024-Update
MA_616703g0010 No alias (at5g04200 : 255.0) metacaspase 9 (MC9); FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
PSME_00022545-RA No alias (at5g04200 : 293.0) metacaspase 9 (MC9); FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Potri.010G175000 No alias metacaspase 4 0.03 Orthogroups_2024-Update
Seita.3G192300.1 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.03 Orthogroups_2024-Update
Sobic.004G085800.2 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.01 Orthogroups_2024-Update
Sobic.004G187200.1 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!