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  5. GRMZM2G042889

GRMZM2G042889


Description : autophagy 2


Gene families : OG_42_0005248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G042889
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
PSME_00012393-RA No alias (at3g19190 : 788.0) Encodes autophagy-related 2 (ATG2).;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR015412 Autophagy-rel_C 1339 1432
No external refs found!