GRMZM2G043279


Description : Ribosomal L29 family protein


Gene families : OG_42_0001364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G043279
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
438324 No alias Ribosomal L29 family protein 0.08 Orthogroups_2024-Update
A4A49_28237 No alias 60s ribosomal protein l35-4 0.07 Orthogroups_2024-Update
A4A49_63512 No alias 60s ribosomal protein l35-4 0.05 Orthogroups_2024-Update
At2g39390 No alias 60S ribosomal protein L35-2... 0.04 Orthogroups_2024-Update
Bradi3g43840 No alias Ribosomal L29 family protein 0.04 Orthogroups_2024-Update
Bradi5g07170 No alias Ribosomal L29 family protein 0.05 Orthogroups_2024-Update
Brara.A03526.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.C02014.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.C03268.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.E03085.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre14.g617900 No alias Ribosomal L29 family protein 0.05 Orthogroups_2024-Update
Glyma.10G291500 No alias Ribosomal L29 family protein 0.07 Orthogroups_2024-Update
Glyma.20G240700 No alias Ribosomal L29 family protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G068120.2 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00608_0050 kfl00608_0050_v1.1 (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.03 Orthogroups_2024-Update
MA_10429159g0020 No alias (at5g02610 : 210.0) Ribosomal L29 family protein ;... 0.07 Orthogroups_2024-Update
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.05 Orthogroups_2024-Update
PSME_00020825-RA No alias (at5g02610 : 157.0) Ribosomal L29 family protein ;... 0.07 Orthogroups_2024-Update
Potri.008G048800 No alias Ribosomal L29 family protein 0.05 Orthogroups_2024-Update
Potri.010G212300 No alias Ribosomal L29 family protein 0.05 Orthogroups_2024-Update
Pp1s102_67V6 No alias 60s ribosomal protein l35 0.07 Orthogroups_2024-Update
Pp1s133_93V6 No alias 60s ribosomal protein l35 0.1 Orthogroups_2024-Update
Pp1s1_489V6 No alias 60s ribosomal protein l35 0.09 Orthogroups_2024-Update
Seita.1G166300.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Seita.7G064700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.004G152400.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Sobic.004G152700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Solyc04g010240 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.08 Orthogroups_2024-Update
Solyc05g054810 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.07 Orthogroups_2024-Update
Sopen04g005430 No alias Ribosomal L29 protein 0.04 Orthogroups_2024-Update
Sopen05g033280 No alias Ribosomal L29 protein 0.04 Orthogroups_2024-Update
evm.model.contig_654.2 No alias (at5g02610 : 134.0) Ribosomal L29 family protein ;... 0.1 Orthogroups_2024-Update
evm.model.tig00000241.79 No alias (at3g55170 : 158.0) Ribosomal L29 family protein ;... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 64
No external refs found!