1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G044137

GRMZM2G044137


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein


Gene families : OG_42_0001724 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001724_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G044137
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
19071 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 Orthogroups_2024-Update
A4A49_02333 No alias 60s ribosomal protein l30-2 0.08 Orthogroups_2024-Update
A4A49_19973 No alias 60s ribosomal protein l30-2 0.06 Orthogroups_2024-Update
A4A49_60378 No alias 60s ribosomal protein l30-2 0.03 Orthogroups_2024-Update
Bradi1g31460 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 Orthogroups_2024-Update
Bradi2g10400 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 Orthogroups_2024-Update
Bradi2g21770 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 Orthogroups_2024-Update
Brara.A02913.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.C03701.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.E02321.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.G02123.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.G03541.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Cre10.g420750 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.05 Orthogroups_2024-Update
Glyma.02G002300 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 Orthogroups_2024-Update
Glyma.08G257100 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 Orthogroups_2024-Update
Glyma.18G281200 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.05 Orthogroups_2024-Update
HORVU7Hr1G110660.2 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
LOC_Os01g59730 No alias ribosomal protein L7Ae, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g41110 No alias ribosomal protein L7Ae, putative, expressed 0.03 Orthogroups_2024-Update
MA_10431626g0010 No alias (o49884|rl30_luplu : 184.0) 60S ribosomal protein L30 -... 0.05 Orthogroups_2024-Update
MA_6354g0010 No alias (o49884|rl30_luplu : 204.0) 60S ribosomal protein L30 -... 0.11 Orthogroups_2024-Update
Mp7g01690.1 No alias component RPL30 of LSU proteome component 0.05 Orthogroups_2024-Update
PSME_00026808-RA No alias (o49884|rl30_luplu : 160.0) 60S ribosomal protein L30 -... 0.07 Orthogroups_2024-Update
PSME_00033349-RA No alias (o49884|rl30_luplu : 192.0) 60S ribosomal protein L30 -... 0.06 Orthogroups_2024-Update
Pp1s106_167V6 No alias ribosomal protein l30 0.07 Orthogroups_2024-Update
Pp1s13_391V6 No alias ribosomal protein l30 0.1 Orthogroups_2024-Update
Pp1s41_251V6 No alias ribosomal protein l30 0.09 Orthogroups_2024-Update
Pp1s50_55V6 No alias ribosomal protein l30 0.03 Orthogroups_2024-Update
Seita.5G043000.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.009G179100.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Solyc01g009100 No alias 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) 0.09 Orthogroups_2024-Update
Solyc04g072660 No alias 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) 0.06 Orthogroups_2024-Update
Solyc11g071490 No alias 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) 0.06 Orthogroups_2024-Update
Sopen01g004590 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 0.08 Orthogroups_2024-Update
Sopen04g028860 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 0.02 Orthogroups_2024-Update
Sopen11g029180 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 0.08 Orthogroups_2024-Update
evm.model.contig_3502.5 No alias (q9sdg6|rl30_orysa : 151.0) 60S ribosomal protein L30 -... 0.1 Orthogroups_2024-Update
evm.model.tig00001164.6 No alias (o49884|rl30_luplu : 168.0) 60S ribosomal protein L30 -... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004817 cysteine-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 13 105
No external refs found!