GRMZM2G045398


Description : brassinosteroid-responsive RING-H2


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G045398
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Bradi3g39110 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g04540 No alias RING-H2 finger protein 2B 0.03 Orthogroups_2024-Update
HORVU5Hr1G071280.1 No alias E3 ubiquitin ligase *(XERICO) 0.03 Orthogroups_2024-Update
Potri.002G161900 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
Sobic.006G188700.1 No alias E3 ubiquitin ligase *(BRH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 92 136
No external refs found!