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GRMZM2G046888


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0011066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G046888
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Seita.9G545300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g120460 No alias Pentatricopeptide repeat-containing protein family (AHRD... 0.03 Orthogroups_2024-Update
Sopen00g010440 No alias PPR repeat 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 267 314
IPR002885 Pentatricopeptide_repeat 373 399
IPR002885 Pentatricopeptide_repeat 167 197
IPR002885 Pentatricopeptide_repeat 240 260
IPR032867 DYW_dom 441 552
No external refs found!