Description : RNA helicase, ATP-dependent, SK12/DOB1 protein
Gene families : OG_42_0001297 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM2G047949 | |
Cluster | HCCA clusters: Cluster_59 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi3g04550 | No alias | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.03 | Orthogroups_2024-Update | |
Brara.E03073.1 | No alias | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G018990.2 | No alias | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.05 | Orthogroups_2024-Update | |
Mp1g05510.1 | No alias | RNA helicase component SKI2 of SUPERKILLER (SKI)... | 0.03 | Orthogroups_2024-Update | |
PSME_00022970-RA | No alias | (at2g06990 : 1419.0) encodes a putative DExH-box RNA... | 0.03 | Orthogroups_2024-Update | |
Sobic.004G048800.1 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation complex | 0.04 | Orthogroups_2024-Update | |
evm.model.contig_2284.16 | No alias | (at1g59760 : 812.0) RNA helicase, ATP-dependent,... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Predicted GO |
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
BP | GO:0016579 | protein deubiquitination | IEP | Predicted GO |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
BP | GO:0022406 | membrane docking | IEP | Predicted GO |
MF | GO:0031491 | nucleosome binding | IEP | Predicted GO |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
BP | GO:0051640 | organelle localization | IEP | Predicted GO |
BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
BP | GO:0070646 | protein modification by small protein removal | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
BP | GO:0140029 | exocytic process | IEP | Predicted GO |
BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
No external refs found! |