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GRMZM2G048205


Description : Calcium-binding endonuclease/exonuclease/phosphatase family


Gene families : OG_42_0004475 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G048205
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
126213 No alias Calcium-binding endonuclease/exonuclease/phosphatase family 0.02 Orthogroups_2024-Update
Bradi3g23040 No alias Calcium-binding endonuclease/exonuclease/phosphatase family 0.04 Orthogroups_2024-Update
Brara.I05582.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.J00089.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.J00891.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Glyma.16G016300 No alias Calcium-binding endonuclease/exonuclease/phosphatase family 0.03 Orthogroups_2024-Update
Seita.9G277200.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.001G263100.2 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 35 295
IPR002048 EF_hand_dom 348 373
No external refs found!