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At1g17480


Description : At1g17480 [Source:UniProtKB/TrEMBL;Acc:Q2NND9]


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g17480
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G433557 No alias IQ-domain 5 0.03 Orthogroups_2024-Update
HORVU3Hr1G117790.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_83892g0010 No alias (at2g26180 : 263.0) IQ-domain 6 (IQD6); CONTAINS... 0.03 Orthogroups_2024-Update
Mp5g20460.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.001G375700 No alias IQ-domain 10 0.03 Orthogroups_2024-Update
Pp1s161_50V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s34_311V6 No alias MKA23.10; calmodulin-binding family protein [Arabidopsis... 0.02 Orthogroups_2024-Update
Pp1s372_8V6 No alias MKA23.10; calmodulin-binding family protein [Arabidopsis... 0.03 Orthogroups_2024-Update
Seita.5G371000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G174900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g121760 No alias SUN-like protein 11 0.07 Orthogroups_2024-Update
Solyc08g062940 No alias SUN-like protein 22 0.06 Orthogroups_2024-Update
Sopen08g018490 No alias IQ calmodulin-binding motif 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
CC GO:0008290 F-actin capping protein complex IEP Predicted GO
BP GO:0010639 negative regulation of organelle organization IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030832 regulation of actin filament length IEP Predicted GO
BP GO:0030833 regulation of actin filament polymerization IEP Predicted GO
BP GO:0030834 regulation of actin filament depolymerization IEP Predicted GO
BP GO:0030835 negative regulation of actin filament depolymerization IEP Predicted GO
BP GO:0030837 negative regulation of actin filament polymerization IEP Predicted GO
BP GO:0031333 negative regulation of protein complex assembly IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0032271 regulation of protein polymerization IEP Predicted GO
BP GO:0032272 negative regulation of protein polymerization IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predicted GO
BP GO:0032970 regulation of actin filament-based process IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043242 negative regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0043254 regulation of protein complex assembly IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051016 barbed-end actin filament capping IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051129 negative regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051494 negative regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051693 actin filament capping IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
BP GO:0110053 regulation of actin filament organization IEP Predicted GO
BP GO:1901879 regulation of protein depolymerization IEP Predicted GO
BP GO:1901880 negative regulation of protein depolymerization IEP Predicted GO
BP GO:1902903 regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 95 114
IPR000048 IQ_motif_EF-hand-BS 117 134
No external refs found!