Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM2G050218 | |
Cluster | HCCA clusters: Cluster_79 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_05017 | No alias | heterogeneous nuclear ribonucleoprotein 1 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G014400 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
Kfl00222_0020 | kfl00222_0020_v1.1 | (at1g17640 : 196.0) RNA-binding (RRM/RBD/RNP motifs)... | 0.02 | Orthogroups_2024-Update | |
MA_125759g0010 | No alias | (at3g13224 : 273.0) RNA-binding (RRM/RBD/RNP motifs)... | 0.03 | Orthogroups_2024-Update | |
MA_141102g0010 | No alias | (at3g13224 : 259.0) RNA-binding (RRM/RBD/RNP motifs)... | 0.03 | Orthogroups_2024-Update | |
MA_68291g0010 | No alias | (at3g13224 : 261.0) RNA-binding (RRM/RBD/RNP motifs)... | 0.02 | Orthogroups_2024-Update | |
Potri.002G115000 | No alias | RNA-binding protein 1 | 0.03 | Orthogroups_2024-Update | |
Potri.003G040900 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
Solyc04g014820 | No alias | RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC) | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
MF | GO:0003873 | 6-phosphofructo-2-kinase activity | IEP | Predicted GO |
MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0006000 | fructose metabolic process | IEP | Predicted GO |
BP | GO:0006914 | autophagy | IEP | Predicted GO |
MF | GO:0017069 | snRNA binding | IEP | Predicted GO |
MF | GO:0017070 | U6 snRNA binding | IEP | Predicted GO |
MF | GO:0030623 | U5 snRNA binding | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predicted GO |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Predicted GO |
CC | GO:1902911 | protein kinase complex | IEP | Predicted GO |
CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Predicted GO |
No external refs found! |