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  5. GRMZM2G050774

GRMZM2G050774


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G050774
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_24557 No alias ring-h2 finger protein atl73 0.02 Orthogroups_2024-Update
At1g33480 No alias RING-H2 finger protein ATL58... 0.03 Orthogroups_2024-Update
At2g42350 No alias RING-H2 finger protein ATL40... 0.03 Orthogroups_2024-Update
Bradi2g26403 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g18837 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.I02379.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G135011 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G480106 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G068200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G022830.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU4Hr1G082740.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Kfl00034_0310 kfl00034_0310_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os01g61470 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g52210 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g58540 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G032300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s102_105V6 No alias ring finger 0.03 Orthogroups_2024-Update
Pp1s185_137V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s71_157V6 No alias ac009177_16 ring-h2 zinc finger protein atl6 0.03 Orthogroups_2024-Update
Seita.4G173000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.003G344400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G109100.3 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G279000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.006G184500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G056600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.010G157300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g100100 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc04g014220 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.04 Orthogroups_2024-Update
Solyc12g087840 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen03g041450 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 103 146
No external refs found!