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  5. GRMZM2G052178

GRMZM2G052178


Description : Function unknown


Gene families : OG_42_0005877 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005877_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Zea release: GRMZM2G052178
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Bradi5g26400 No alias Function unknown 0.08 Orthogroups_2024-Update
Brara.G00543.1 No alias SSU processome assembly factor *(ENP1) 0.06 Orthogroups_2024-Update
Cre01.g063267 No alias Function unknown 0.04 Orthogroups_2024-Update
Pp1s51_33V6 No alias F27M3.14; bystin family [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.3G013300.1 No alias SSU processome assembly factor *(ENP1) 0.03 Orthogroups_2024-Update
Sobic.006G269900.1 No alias SSU processome assembly factor *(ENP1) 0.07 Orthogroups_2024-Update
Solyc07g056550 No alias bystin-like protein (AHRD V3.3 *** AT1G31660.1) 0.03 Orthogroups_2024-Update
Sopen07g029910 No alias Bystin 0.05 Orthogroups_2024-Update
evm.model.tig00000829.16 No alias (at1g31660 : 299.0) CONTAINS InterPro DOMAIN/s: Bystin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007955 Bystin 146 429
No external refs found!