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  5. GRMZM2G053991

GRMZM2G053991


Description : aluminum sensitive 3


Gene families : OG_42_0004017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G053991
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G175800 No alias aluminum sensitive 3 0.04 Orthogroups_2024-Update
Glyma.10G047100 No alias aluminum sensitive 3 0.04 Orthogroups_2024-Update
Potri.016G082100 No alias aluminum sensitive 3 0.02 Orthogroups_2024-Update
Seita.3G043600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005226 UPF0014_fam 113 295
IPR005226 UPF0014_fam 36 105
No external refs found!