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GRMZM2G054040


Description : RNA-binding CRS1 / YhbY (CRM) domain protein


Gene families : OG_42_0001255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G054040
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_09081 No alias putative crm domain-containing protein, chloroplastic 0.03 Orthogroups_2024-Update
AC214507.3_FG001 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.01 Orthogroups_2024-Update
Glyma.05G236500 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 133 217
No external refs found!