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  5. GRMZM2G054201

GRMZM2G054201


Description : Ribosomal protein L11 family protein


Gene families : OG_42_0001717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G054201
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
227409 No alias Ribosomal protein L11 family protein 0.13 Orthogroups_2024-Update
A4A49_09340 No alias 60s ribosomal protein l12 0.04 Orthogroups_2024-Update
A4A49_19100 No alias 60s ribosomal protein l12 0.04 Orthogroups_2024-Update
A4A49_58419 No alias 60s ribosomal protein l12 0.08 Orthogroups_2024-Update
Bradi3g52460 No alias Ribosomal protein L11 family protein 0.11 Orthogroups_2024-Update
Bradi5g20330 No alias Ribosomal protein L11 family protein 0.06 Orthogroups_2024-Update
Brara.C01863.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.D00531.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Brara.D02258.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Brara.G01587.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.I03633.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.J01420.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre12.g528750 No alias Ribosomal protein L11 family protein 0.07 Orthogroups_2024-Update
Glyma.10G053100 No alias Ribosomal protein L11 family protein 0.09 Orthogroups_2024-Update
Glyma.11G146300 No alias Ribosomal protein L11 family protein 0.02 Orthogroups_2024-Update
Glyma.12G075500 No alias Ribosomal protein L11 family protein 0.09 Orthogroups_2024-Update
Glyma.13G140100 No alias Ribosomal protein L11 family protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G102610.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
HORVU6Hr1G067870.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Kfl00125_0170 kfl00125_0170_v1.1 (at2g37190 : 245.0) Ribosomal protein L11 family... 0.06 Orthogroups_2024-Update
LOC_Os02g47140 No alias L11 domain containing ribosomal protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g50990 No alias L11 domain containing ribosomal protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10427147g0010 No alias (at5g60670 : 270.0) Ribosomal protein L11 family... 0.03 Orthogroups_2024-Update
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.06 Orthogroups_2024-Update
Pp1s104_128V6 No alias 60s ribosomal protein l12 0.09 Orthogroups_2024-Update
Pp1s14_191V6 No alias 60s ribosomal protein l12 0.04 Orthogroups_2024-Update
Pp1s242_7V6 No alias 60s ribosomal protein l12 0.11 Orthogroups_2024-Update
Pp1s280_55V6 No alias 60s ribosomal protein l12 0.05 Orthogroups_2024-Update
Pp1s280_63V6 No alias 60s ribosomal protein l12 0.02 Orthogroups_2024-Update
Pp1s78_212V6 No alias 60s ribosomal protein l12 0.11 Orthogroups_2024-Update
Seita.1G284700.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Seita.7G078800.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Seita.7G222200.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.004G271400.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Sobic.006G057200.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.006G201500.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Solyc06g075180 No alias 60S ribosomal protein L12 (AHRD V3.3 *** K7WTX4_SOLTU) 0.04 Orthogroups_2024-Update
Solyc11g065670 No alias 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) 0.12 Orthogroups_2024-Update
Solyc11g069440 No alias 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) 0.04 Orthogroups_2024-Update
Sopen06g031590 No alias Ribosomal protein L11, N-terminal domain 0.06 Orthogroups_2024-Update
Sopen11g025410 No alias Ribosomal protein L11, N-terminal domain 0.14 Orthogroups_2024-Update
evm.model.contig_2343.1 No alias (at5g60670 : 215.0) Ribosomal protein L11 family... 0.16 Orthogroups_2024-Update
evm.model.tig00001339.27 No alias (at5g60670 : 218.0) Ribosomal protein L11 family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR020783 Ribosomal_L11_C 75 144
IPR020784 Ribosomal_L11_N 11 70
No external refs found!