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  5. GRMZM2G055158

GRMZM2G055158


Description : myb domain protein 20


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G055158
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
At2g16720 No alias Transcription factor MYB7... 0.03 Orthogroups_2024-Update
Bradi3g49180 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Bradi4g36460 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Brara.G01033.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Brara.I00102.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.J02324.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.15G041100 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.20G090700 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
HORVU0Hr1G001230.9 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G023510.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G028780.3 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.02 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00023605-RA No alias (p20026|myb1_horvu : 272.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00042627-RA No alias (at3g61250 : 265.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00050866-RA No alias (at1g22640 : 150.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00051633-RA No alias (at3g61250 : 281.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00052620-RA No alias (at3g13540 : 220.0) Encodes a member of the MYB family... 0.02 Orthogroups_2024-Update
Potri.002G173900 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
Potri.004G086300 No alias myb domain protein 43 0.02 Orthogroups_2024-Update
Potri.008G081600 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Sobic.005G155900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G016633.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc02g086690 No alias Myb-related protein (AHRD V3.3 *-* A0A0B0P535_GOSAR) 0.04 Orthogroups_2024-Update
Solyc03g059200 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRF2_SALMI) 0.02 Orthogroups_2024-Update
Solyc05g053330 No alias MYB transcription factor (AHRD V3.3 *** Q39550_CRAPL) 0.02 Orthogroups_2024-Update
Solyc06g073640 No alias GAMYB-like2 0.03 Orthogroups_2024-Update
Sopen02g024100 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen02g032700 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g004090 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g030050 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 71 111
IPR001005 SANT/Myb 14 61
No external refs found!