GRMZM2G055204

Description : related to AP2 4

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G055204
Cluster	HCCA clusters: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method
A4A49_13998	No alias	ethylene-responsive transcription factor 4	0.03	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.03	Orthogroups_2024-Update
A4A49_21212	No alias	ethylene-responsive transcription factor erf008	0.04	Orthogroups_2024-Update
At1g22190	No alias	Ethylene-responsive transcription factor RAP2-13...	0.03	Orthogroups_2024-Update
At2g47520	No alias	Ethylene-responsive transcription factor ERF071...	0.03	Orthogroups_2024-Update
At3g61630	No alias	CRF6 [Source:UniProtKB/TrEMBL;Acc:A0A178VFH2]	0.02	Orthogroups_2024-Update
At5g19790	No alias	Ethylene-responsive transcription factor RAP2-11...	0.02	Orthogroups_2024-Update
At5g52020	No alias	Ethylene-responsive transcription factor ERF025...	0.02	Orthogroups_2024-Update
Bradi3g49810	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.A01788.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.B00253.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.B02302.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.D01390.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Brara.D02156.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.G01019.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Brara.G02121.1	No alias	subgroup ERF-I transcription factor	0.06	Orthogroups_2024-Update
Brara.G03123.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.H01777.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.I00528.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I01789.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.K01077.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
GRMZM2G019443	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Glyma.09G072000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G147200	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
Glyma.10G119100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G014800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G233900	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Glyma.17G124100	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.18G252400	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.20G070100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G055710.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G071890.2	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G036590.2	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
LOC_Os08g43210	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_3405g0010	No alias	(q40476\|erf1_tobac : 120.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_54341g0010	No alias	(at1g15360 : 131.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00022946-RA	No alias	(at5g61890 : 105.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00054473-RA	No alias	(at5g64750 : 103.0) Encodes a putative transcription...	0.04	Orthogroups_2024-Update
PSME_00056197-RA	No alias	(at5g67190 : 143.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.003G079300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.003G161000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.014G055700	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Potri.016G018600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s259_104V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s53_80V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.3G289200.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Seita.7G098100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G481600.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.002G081300.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.004G295500.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G331300.2	No alias	subgroup ERF-V transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Sobic.010G071700.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Sobic.010G240900.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc01g065980	No alias	Ethylene Response Factor E.4	0.02	Orthogroups_2024-Update
Solyc01g090560	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.02	Orthogroups_2024-Update
Solyc05g050830	No alias	Ethylene-responsive transcription factor4	0.04	Orthogroups_2024-Update
Solyc08g066660	No alias	Ethylene-responsive transcription factor TINY (AHRD V3.3...	0.02	Orthogroups_2024-Update
Solyc12g008350	No alias	dehydration responsive element binding protein 2	0.04	Orthogroups_2024-Update
Sopen06g018310	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen07g033090	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen10g008890	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
MF	GO:0005543	phospholipid binding	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
CC	GO:0097525	spliceosomal snRNP complex	IEP	Predicted GO
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Predicted GO
CC	GO:0120114	Sm-like protein family complex	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	165	213

External Links

No external refs found!

GRMZM2G055204

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation