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  5. GRMZM2G056826

GRMZM2G056826


Description : Ankyrin repeat family protein


Gene families : OG_42_0000570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000570_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G056826
Cluster HCCA clusters: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g19050 No alias embryogenesis transmembrane protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g19360 No alias cadmium tolerance factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g45580 No alias embryogenesis transmembrane protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.4G128100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G038200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 462 571
IPR026961 PGG_dom 321 402
IPR026961 PGG_dom 197 274
IPR026961 PGG_dom 30 137
IPR026961 PGG_dom 982 1090
IPR026961 PGG_dom 771 884
IPR026961 PGG_dom 653 705
No external refs found!