At1g18860

Description : WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g18860
Cluster	HCCA clusters: Cluster_214

Target	Alias	Description	ECC score	Gene Family Method
Brara.B00003.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00458.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G106560	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
GRMZM2G163418	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.03G109100	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.03G256700	No alias	WRKY DNA-binding protein 30	0.03	Orthogroups_2024-Update
Glyma.05G123000	No alias	WRKY DNA-binding protein 9	0.06	Orthogroups_2024-Update
Glyma.06G168400	No alias	WRKY DNA-binding protein 75	0.02	Orthogroups_2024-Update
Glyma.08G143400	No alias	WRKY DNA-binding protein 13	0.03	Orthogroups_2024-Update
Glyma.10G230200	No alias	WRKY DNA-binding protein 27	0.03	Orthogroups_2024-Update
Glyma.15G139000	No alias	WRKY DNA-binding protein 48	0.03	Orthogroups_2024-Update
Glyma.16G219800	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Glyma.18G208800	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.18G213200	No alias	WRKY DNA-binding protein 70	0.04	Orthogroups_2024-Update
HORVU2Hr1G029430.2	No alias	WRKY-type transcription factor	0.06	Orthogroups_2024-Update
HORVU3Hr1G071750.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU3Hr1G088200.5	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU4Hr1G052010.2	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os03g20550	No alias	WRKY55, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g49210	No alias	WRKY43, expressed	0.02	Orthogroups_2024-Update
PSME_00028885-RA	No alias	(at5g15130 : 194.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00033789-RA	No alias	(at2g38470 : 152.0) Member of the plant WRKY...	0.03	Orthogroups_2024-Update
PSME_00035159-RA	No alias	(at1g29860 : 115.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
PSME_00036210-RA	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.04	Orthogroups_2024-Update
PSME_00051212-RA	No alias	(at4g11070 : 110.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
PSME_00051522-RA	No alias	(at2g34830 : 207.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00053369-RA	No alias	(at2g34830 : 184.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.011G157100	No alias	WRKY DNA-binding protein 14	0.03	Orthogroups_2024-Update
Potri.017G149000	No alias	WRKY DNA-binding protein 27	0.03	Orthogroups_2024-Update
Seita.9G359600.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G013600.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc03g116890	No alias	WRKY transcription factor 39	0.03	Orthogroups_2024-Update
Solyc12g014610	No alias	WRKY transcription factor 20	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Predicted GO
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predicted GO
BP	GO:0042255	ribosome assembly	IEP	Predicted GO
BP	GO:0042256	mature ribosome assembly	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0070925	organelle assembly	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	239	297

External Links

No external refs found!

At1g18860

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation