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  5. GRMZM2G057176

GRMZM2G057176


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G057176
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
At3g63370 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 Orthogroups_2024-Update
GRMZM2G029859 No alias dynamin-like protein 6 0.03 Orthogroups_2024-Update
GRMZM2G163359 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G079860.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G014730.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G011570.2 No alias RNA editing factor *(CRR22) 0.02 Orthogroups_2024-Update
LOC_Os06g40860 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g24680 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00001463-RA No alias (at4g33170 : 587.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00014882-RA No alias (at4g13650 : 307.0) Pentatricopeptide repeat (PPR)... 0.01 Orthogroups_2024-Update
Seita.4G046800.1 No alias RNA editing factor *(MEF29) 0.01 Orthogroups_2024-Update
Sopen09g004550 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 668 792
IPR002885 Pentatricopeptide_repeat 394 440
IPR002885 Pentatricopeptide_repeat 260 306
IPR002885 Pentatricopeptide_repeat 495 541
IPR002885 Pentatricopeptide_repeat 569 593
IPR002885 Pentatricopeptide_repeat 469 491
IPR002885 Pentatricopeptide_repeat 230 253
IPR002885 Pentatricopeptide_repeat 365 392
No external refs found!