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  5. GRMZM2G058133

GRMZM2G058133


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0010023 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G058133
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
At5g15300 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.03 Orthogroups_2024-Update
Glyma.18G261200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G086100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G526300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G491500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen02g032860 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 213 236
IPR002885 Pentatricopeptide_repeat 420 444
IPR002885 Pentatricopeptide_repeat 74 101
IPR002885 Pentatricopeptide_repeat 182 206
IPR002885 Pentatricopeptide_repeat 242 289
IPR002885 Pentatricopeptide_repeat 344 391
No external refs found!