1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G058970

GRMZM2G058970


Description : zinc knuckle (CCHC-type) family protein


Gene families : OG_42_0004333 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004333_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G058970
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
A4A49_11642 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At5g49930 No alias Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7] 0.02 Orthogroups_2024-Update
Bradi4g04650 No alias zinc knuckle (CCHC-type) family protein 0.05 Orthogroups_2024-Update
Glyma.09G031900 No alias zinc knuckle (CCHC-type) family protein 0.03 Orthogroups_2024-Update
Glyma.15G136900 No alias zinc knuckle (CCHC-type) family protein 0.03 Orthogroups_2024-Update
Kfl00401_0015 kfl00401_0015_v1.1 (at5g49930 : 118.0) embryo defective 1441 (emb1441);... 0.02 Orthogroups_2024-Update
Kfl00799_0050 kfl00799_0050_v1.1 (at5g49930 : 730.0) embryo defective 1441 (emb1441);... 0.07 Orthogroups_2024-Update
Mp1g00940.1 No alias component RQC2 of Ribosome-associated Quality Control... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR008532 DUF814 574 608
No external refs found!