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  5. GRMZM2G060561

GRMZM2G060561


Description : casein lytic proteinase B4


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G060561
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
174539 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Bradi3g44335 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
Cre11.g467575 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Mp1g16450.1 No alias cytosolic chaperone (Hsp101) 0.02 Orthogroups_2024-Update
PSME_00000477-RA No alias (q6f2y7|hs101_orysa : 1387.0) Heat shock protein 101 -... 0.02 Orthogroups_2024-Update
Potri.017G090600 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Pp1s23_102V6 No alias atpase aaa-2 domain protein 0.04 Orthogroups_2024-Update
Pp1s252_87V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
Sopen06g006060 No alias AAA domain (Cdc48 subfamily) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004176 Clp_N 193 244
IPR004176 Clp_N 116 167
IPR019489 Clp_ATPase_C 875 954
IPR003959 ATPase_AAA_core 303 419
IPR003959 ATPase_AAA_core 699 868
No external refs found!