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GRMZM2G060817


Description : periodic tryptophan protein 2


Gene families : OG_42_0004382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G060817
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Brara.F01061.1 No alias SSU processome assembly factor *(UTP1/PWP2) 0.03 Orthogroups_2024-Update
Cre06.g254150 No alias periodic tryptophan protein 2 0.02 Orthogroups_2024-Update
LOC_Os05g44320 No alias WD domain, G-beta repeat domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s87_39V6 No alias T16N11.20; transducin family protein / WD-40 repeat... 0.03 Orthogroups_2024-Update
Solyc03g120080 No alias WD40 repeat-like protein (AHRD V3.3 *** I0YM64_COCSC) 0.03 Orthogroups_2024-Update
evm.model.tig00000076.88 No alias (at1g15440 : 197.0) periodic tryptophan protein 2... 0.02 Orthogroups_2024-Update
evm.model.tig00000076.89 No alias (at1g15440 : 99.4) periodic tryptophan protein 2 (PWP2);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 408 444
IPR001680 WD40_repeat 493 530
IPR001680 WD40_repeat 134 167
IPR001680 WD40_repeat 371 401
IPR001680 WD40_repeat 543 572
IPR007148 SSU_processome_Utp12 775 880
No external refs found!