GRMZM2G060876

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G060876
Cluster	HCCA clusters: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
A4A49_04007	No alias	ethylene-responsive transcription factor abr1	0.06	Orthogroups_2024-Update
A4A49_20472	No alias	ethylene-responsive transcription factor 13	0.02	Orthogroups_2024-Update
A4A49_30738	No alias	ethylene-responsive transcription factor abr1	0.02	Orthogroups_2024-Update
At1g28360	No alias	Ethylene-responsive transcription factor 12...	0.02	Orthogroups_2024-Update
At2g31230	No alias	Ethylene-responsive transcription factor 15...	0.03	Orthogroups_2024-Update
At3g23220	No alias	Ethylene-responsive transcription factor ERF095...	0.02	Orthogroups_2024-Update
At3g50260	No alias	Ethylene-responsive transcription factor ERF011...	0.04	Orthogroups_2024-Update
At4g34410	No alias	Ethylene-responsive transcription factor ERF109...	0.03	Orthogroups_2024-Update
At5g61600	No alias	Ethylene-responsive transcription factor ERF104...	0.04	Orthogroups_2024-Update
Bradi1g71740	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi3g51630	No alias	C-repeat/DRE binding factor 2	0.02	Orthogroups_2024-Update
Brara.A02830.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Brara.B00415.1	No alias	subgroup ERF-III transcription factor	0.06	Orthogroups_2024-Update
Brara.C01595.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Brara.F02347.1	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Brara.H00115.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.04	Orthogroups_2024-Update
Brara.K00718.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
GRMZM2G020016	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
GRMZM2G039112	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
GRMZM2G425798	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.01G225000	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Glyma.03G116700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G049800	No alias	Integrase-type DNA-binding superfamily protein	0.07	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.13G274100	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.16G079600	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G103660.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU4Hr1G077310.1	No alias	subgroup ERF-VII transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G062430.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G082880.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
LOC_Os05g41760	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g22730	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
MA_10436317g0020	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_28894g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_356609g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_426919g0020	No alias	(at1g19210 : 104.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_6447416g0010	No alias	(at4g17500 : 134.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
MA_81029g0010	No alias	(q9sxs8\|erf3_tobac : 95.1) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_959784g0010	No alias	(at1g19210 : 119.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00007051-RA	No alias	(at1g74930 : 102.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
PSME_00046682-RA	No alias	(at3g16770 : 96.3) Encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
Potri.001G157100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.005G233300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s14_458V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s15_480V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s233_111V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s276_3V6	No alias	transcriptional factor	0.04	Orthogroups_2024-Update
Pp1s64_47V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s7_472V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Seita.1G174700.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.3G192000.1	No alias	subgroup ERF-VIII transcription factor	0.05	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.6G023800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.6G227100.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.8G237900.1	No alias	Unknown function	0.06	Orthogroups_2024-Update
Sobic.002G350500.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Sobic.004G084600.1	No alias	cutin and suberin biosynthesis transcription factor...	0.06	Orthogroups_2024-Update
Sobic.004G233200.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G052600.1	No alias	subgroup ERF-II-DEAR transcription factor	0.08	Orthogroups_2024-Update
Solyc03g123500	No alias	GCC box binding protein C.4	0.03	Orthogroups_2024-Update
Solyc04g071770	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen00g003270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen03g033540	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen03g039660	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g033090	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen12g003310	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	167	215

External Links

No external refs found!

GRMZM2G060876

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation