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  5. GRMZM2G061602

GRMZM2G061602


Description : SPA1-related 4


Gene families : OG_42_0000717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G061602
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
101888 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
141846 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
171333 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
98534 No alias SPA1-related 4 0.03 Orthogroups_2024-Update
A4A49_12413 No alias e3 ubiquitin-protein ligase cop1 0.03 Orthogroups_2024-Update
A4A49_24619 No alias protein suppressor of phya-105 1 0.03 Orthogroups_2024-Update
A4A49_29187 No alias protein spa1-related 2 0.02 Orthogroups_2024-Update
A4A49_35805 No alias e3 ubiquitin-protein ligase cop1 0.03 Orthogroups_2024-Update
At1g53090 No alias SPA4 [Source:UniProtKB/TrEMBL;Acc:A0A178WBA0] 0.03 Orthogroups_2024-Update
At2g46340 No alias SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9] 0.03 Orthogroups_2024-Update
Bradi2g48657 No alias SPA1-related 4 0.03 Orthogroups_2024-Update
Brara.C02328.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.04 Orthogroups_2024-Update
Brara.E01100.1 No alias component *(COP1) of COP1-SPA light signal transduction... 0.03 Orthogroups_2024-Update
GRMZM2G126795 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G058200 No alias SPA (suppressor of phyA-105) protein family 0.02 Orthogroups_2024-Update
Glyma.13G276700 No alias SPA1-related 3 0.03 Orthogroups_2024-Update
HORVU1Hr1G090080.2 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 Orthogroups_2024-Update
HORVU6Hr1G079680.3 No alias component *(COP1) of COP1-SPA light signal transduction... 0.03 Orthogroups_2024-Update
LOC_Os02g53140 No alias COP1, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os05g49590 No alias suppressor of phythchrome A, putative, expressed 0.05 Orthogroups_2024-Update
MA_10426100g0010 No alias (at2g46340 : 564.0) Encodes a member of the SPA... 0.02 Orthogroups_2024-Update
Potri.001G399600 No alias SPA1-related 3 0.04 Orthogroups_2024-Update
Potri.014G159300 No alias Transducin/WD40 repeat-like superfamily protein 0.06 Orthogroups_2024-Update
Pp1s154_52V6 No alias ubiquitin ligase protein 0.02 Orthogroups_2024-Update
Pp1s180_148V6 No alias ubiquitin ligase protein 0.02 Orthogroups_2024-Update
Seita.1G334800.1 No alias component *(COP1) of COP1-SPA light signal transduction... 0.03 Orthogroups_2024-Update
Seita.3G139600.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 Orthogroups_2024-Update
Sobic.003G282000.1 No alias component *(SPA) of substrate adaptor module of... 0.02 Orthogroups_2024-Update
Sobic.004G312600.1 No alias component *(COP1) of COP1-SPA light signal transduction... 0.04 Orthogroups_2024-Update
Sobic.009G238000.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.04 Orthogroups_2024-Update
Solyc07g063120 No alias Ubiquitin ligase protein cop1, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g005950 No alias COP1 homolog 0.02 Orthogroups_2024-Update
Sopen07g031310 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 674 707
IPR001680 WD40_repeat 570 601
No external refs found!