Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM2G061734 | |
Cluster | HCCA clusters: Cluster_183 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre01.g012200 | No alias | squamosa promoter-binding protein-like 12 | 0.01 | Orthogroups_2024-Update | |
Cre02.g104700 | No alias | squamosa promoter-binding protein-like 12 | 0.01 | Orthogroups_2024-Update | |
Cre07.g335150 | No alias | squamosa promoter binding protein-like 4 | 0.01 | Orthogroups_2024-Update | |
Cre16.g686100 | No alias | Squamosa promoter-binding protein-like (SBP domain)... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
BP | GO:0036260 | RNA capping | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004333 | SBP_dom | 109 | 182 |
No external refs found! |