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GRMZM2G063060


Description : ATPase, AAA-type, CDC48 protein


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G063060
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cre09.g398550 No alias cell division cycle 48C 0.01 Orthogroups_2024-Update
Pp1s19_358V6 No alias nuclear vcp-like 0.02 Orthogroups_2024-Update
Sobic.001G501300.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 246 375
IPR003959 ATPase_AAA_core 519 652
IPR003338 CDC4_N-term_subdom 31 112
IPR004201 Cdc48_dom2 132 196
No external refs found!