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Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Gene families : OG_42_0002151 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002151_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G063340 | |
| Cluster | HCCA clusters: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 441919 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.15 | Orthogroups_2024-Update | |
| At2g32060 | No alias | 40S ribosomal protein S12... | 0.06 | Orthogroups_2024-Update | |
| Bradi1g06520 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.13 | Orthogroups_2024-Update | |
| Bradi1g53740 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.18 | Orthogroups_2024-Update | |
| Brara.C01639.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
| Brara.D01947.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Brara.E01168.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
| Brara.F01106.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
| Brara.H02521.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.12 | Orthogroups_2024-Update | |
| Brara.I04904.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Cre04.g214503 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.2 | Orthogroups_2024-Update | |
| Glyma.07G023900 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.09 | Orthogroups_2024-Update | |
| Glyma.08G217700 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.08 | Orthogroups_2024-Update | |
| Glyma.13G369700 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.15G003700 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.06 | Orthogroups_2024-Update | |
| HORVU2Hr1G053290.6 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.12 | Orthogroups_2024-Update | |
| HORVU5Hr1G103330.3 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.13 | Orthogroups_2024-Update | |
| Kfl00170_0060 | kfl00170_0060_v1.1 | (q9xhs0|rs12_horvu : 207.0) 40S ribosomal protein S12 -... | 0.06 | Orthogroups_2024-Update | |
| MA_16920g0010 | No alias | (q9xhs0|rs12_horvu : 225.0) 40S ribosomal protein S12 -... | 0.05 | Orthogroups_2024-Update | |
| Mp7g11470.1 | No alias | component RPS12 of SSU proteome | 0.04 | Orthogroups_2024-Update | |
| PSME_00017034-RA | No alias | (q9xhs0|rs12_horvu : 220.0) 40S ribosomal protein S12 -... | 0.04 | Orthogroups_2024-Update | |
| Potri.001G046600 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.11 | Orthogroups_2024-Update | |
| Potri.002G056200 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.09 | Orthogroups_2024-Update | |
| Pp1s194_130V6 | No alias | 40s ribosomal protein s12 | 0.11 | Orthogroups_2024-Update | |
| Seita.1G205300.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Seita.2G088300.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.16 | Orthogroups_2024-Update | |
| Seita.3G235300.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
| Sobic.002G081600.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.17 | Orthogroups_2024-Update | |
| Sobic.009G144300.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
| Sobic.009G242400.1 | No alias | component *(eS12) of small ribosomal-subunit (SSU) proteome | 0.16 | Orthogroups_2024-Update | |
| Solyc01g103800 | No alias | 40S ribosomal protein S12 (AHRD V3.3 *** K4B1V5_SOLLC) | 0.1 | Orthogroups_2024-Update | |
| Solyc12g042650 | No alias | 40S ribosomal protein S12 (AHRD V3.3 *** M1CSI4_SOLTU) | 0.17 | Orthogroups_2024-Update | |
| Sopen01g046200 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.08 | Orthogroups_2024-Update | |
| Sopen12g021800 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.13 | Orthogroups_2024-Update | |
| evm.model.contig_3478.2 | No alias | (q9xhs0|rs12_horvu : 146.0) 40S ribosomal protein S12 -... | 0.23 | Orthogroups_2024-Update | |
| evm.model.tig00020903.34 | No alias | (q9xhs0|rs12_horvu : 149.0) 40S ribosomal protein S12 -... | 0.13 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0005347 | ATP transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0005471 | ATP:ADP antiporter activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006743 | ubiquinone metabolic process | IEP | Predicted GO |
| BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0006862 | nucleotide transport | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015217 | ADP transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015301 | anion:anion antiporter activity | IEP | Predicted GO |
| MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015748 | organophosphate ester transport | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Predicted GO |
| BP | GO:0042181 | ketone biosynthetic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0045116 | protein neddylation | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| MF | GO:0099516 | ion antiporter activity | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| BP | GO:1901661 | quinone metabolic process | IEP | Predicted GO |
| BP | GO:1901663 | quinone biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 26 | 119 |
| No external refs found! |