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  5. GRMZM2G063617

GRMZM2G063617


Description : Ribosomal L22e protein family


Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G063617
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
270704 No alias Ribosomal L22e protein family 0.08 Orthogroups_2024-Update
A4A49_00389 No alias 60s ribosomal protein l22-2 0.05 Orthogroups_2024-Update
At3g05560 No alias 60S ribosomal protein L22-2... 0.05 Orthogroups_2024-Update
Bradi1g62830 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Brara.A03699.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.C03109.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.E03358.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Brara.F02844.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Cre07.g357850 No alias Ribosomal L22e protein family 0.07 Orthogroups_2024-Update
Glyma.02G017800 No alias Ribosomal L22e protein family 0.06 Orthogroups_2024-Update
Glyma.10G018200 No alias Ribosomal L22e protein family 0.09 Orthogroups_2024-Update
Glyma.19G232700 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
HORVU2Hr1G019160.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
HORVU7Hr1G080630.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Kfl00104_0130 kfl00104_0130_v1.1 (at5g27770 : 144.0) Ribosomal L22e protein family;... 0.05 Orthogroups_2024-Update
LOC_Os07g47710 No alias 60S ribosomal protein L22-2, putative, expressed 0.03 Orthogroups_2024-Update
Potri.005G024400 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Potri.010G012700 No alias Ribosomal L22e protein family 0.08 Orthogroups_2024-Update
Potri.013G015300 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
Potri.014G128800 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Pp1s283_20V6 No alias 60s ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s39_76V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s457_15V6 No alias 60s ribosomal protein 0.08 Orthogroups_2024-Update
Seita.2G429500.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Seita.9G409100.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Sobic.001G376600.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Sobic.002G414700.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Solyc01g099830 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** W9QTY3_9ROSA) 0.08 Orthogroups_2024-Update
Solyc09g075150 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) 0.04 Orthogroups_2024-Update
Solyc09g075160 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) 0.05 Orthogroups_2024-Update
Sopen01g043340 No alias Ribosomal L22e protein family 0.11 Orthogroups_2024-Update
Sopen09g029970 No alias Ribosomal L22e protein family 0.04 Orthogroups_2024-Update
Sopen09g029980 No alias Ribosomal L22e protein family 0.04 Orthogroups_2024-Update
evm.model.contig_2121.19 No alias (at3g05560 : 87.0) Ribosomal L22e protein family;... 0.12 Orthogroups_2024-Update
evm.model.tig00001206.7 No alias (at3g05560 : 112.0) Ribosomal L22e protein family;... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 20 128
No external refs found!