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  5. GRMZM2G063672

GRMZM2G063672


Description : cytochrome BC1 synthesis


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G063672
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Bradi2g44936 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Brara.F03141.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G093760.13 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G057540.3 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU5Hr1G019820.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G098240.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os12g24320 No alias ATPase 3, putative, expressed 0.03 Orthogroups_2024-Update
MA_16312g0010 No alias (at5g40010 : 192.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Seita.9G050000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G067400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 242 371
IPR025753 AAA_N_dom 57 135
No external refs found!