Description : ribosomal protein S27
Gene families : OG_42_0001909 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001909_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM2G066222 | |
Cluster | HCCA clusters: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
163947 | No alias | ribosomal protein S27 | 0.03 | Orthogroups_2024-Update | |
A4A49_15619 | No alias | 40s ribosomal protein s27-2 | 0.05 | Orthogroups_2024-Update | |
Bradi3g43475 | No alias | ribosomal protein S27 | 0.05 | Orthogroups_2024-Update | |
Bradi5g08453 | No alias | ribosomal protein S27 | 0.03 | Orthogroups_2024-Update | |
Brara.B03416.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.F03041.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Brara.G01908.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Brara.I00365.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Brara.I04203.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Cre12.g529400 | No alias | ribosomal protein S27 | 0.05 | Orthogroups_2024-Update | |
Glyma.16G046500 | No alias | ribosomal protein S27 | 0.05 | Orthogroups_2024-Update | |
Glyma.19G105700 | No alias | ribosomal protein S27 | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G014130.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
HORVU4Hr1G074270.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G112740.4 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g27860 | No alias | 40S ribosomal protein S27, putative, expressed | 0.04 | Orthogroups_2024-Update | |
MA_87055g0010 | No alias | (at3g61110 : 146.0) Arabidopsis ribosomal protein;... | 0.05 | Orthogroups_2024-Update | |
Mp5g09510.1 | No alias | component RPS27 of SSU proteome | 0.03 | Orthogroups_2024-Update | |
PSME_00029823-RA | No alias | (at3g61110 : 146.0) Arabidopsis ribosomal protein;... | 0.05 | Orthogroups_2024-Update | |
Potri.003G161200 | No alias | ribosomal protein S27 | 0.03 | Orthogroups_2024-Update | |
Potri.006G192900 | No alias | ribosomal protein S27 | 0.03 | Orthogroups_2024-Update | |
Pp1s165_39V6 | No alias | 40s ribosomal protein | 0.08 | Orthogroups_2024-Update | |
Pp1s17_304V6 | No alias | 40s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s63_161V6 | No alias | 40s ribosomal protein | 0.07 | Orthogroups_2024-Update | |
Seita.1G160500.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Sobic.001G091801.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Sobic.004G145801.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Solyc01g008090 | No alias | 40S ribosomal protein S27 (AHRD V3.3 *-* M0TJU4_MUSAM) | 0.07 | Orthogroups_2024-Update | |
Sopen01g003640 | No alias | Ribosomal protein S27 | 0.05 | Orthogroups_2024-Update | |
evm.model.tig00001299.2 | No alias | (at5g47930 : 145.0) Zinc-binding ribosomal protein... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Predicted GO |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Predicted GO |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005347 | ATP transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005471 | ATP:ADP antiporter activity | IEP | Predicted GO |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Predicted GO |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
BP | GO:0006848 | pyruvate transport | IEP | Predicted GO |
BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Predicted GO |
BP | GO:0006862 | nucleotide transport | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0010011 | auxin binding | IEP | Predicted GO |
MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015217 | ADP transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015301 | anion:anion antiporter activity | IEP | Predicted GO |
MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015718 | monocarboxylic acid transport | IEP | Predicted GO |
BP | GO:0015748 | organophosphate ester transport | IEP | Predicted GO |
MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
CC | GO:0019866 | organelle inner membrane | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Predicted GO |
CC | GO:0030131 | clathrin adaptor complex | IEP | Predicted GO |
MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
MF | GO:0042562 | hormone binding | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0045116 | protein neddylation | IEP | Predicted GO |
BP | GO:0098656 | anion transmembrane transport | IEP | Predicted GO |
MF | GO:0099516 | ion antiporter activity | IEP | Predicted GO |
BP | GO:1901475 | pyruvate transmembrane transport | IEP | Predicted GO |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000592 | Ribosomal_S27e | 30 | 84 |
No external refs found! |