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Description : shikimate kinase 1
Gene families : OG_42_0002393 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002393_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G070218 | |
| Cluster | HCCA clusters: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_03053 | No alias | shikimate kinase, chloroplastic | 0.03 | Orthogroups_2024-Update | |
| Brara.A00060.1 | No alias | EC_2.7 transferase transferring phosphorus-containing... | 0.03 | Orthogroups_2024-Update | |
| Cre10.g436350 | No alias | shikimate kinase 1 | 0.01 | Orthogroups_2024-Update | |
| Glyma.04G219300 | No alias | shikimate kinase 1 | 0.03 | Orthogroups_2024-Update | |
| PSME_00034169-RA | No alias | (at2g21940 : 244.0) shikimate kinase 1 (SK1); FUNCTIONS... | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G236300.1 | No alias | EC_2.7 transferase transferring phosphorus-containing... | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
| MF | GO:0003779 | actin binding | IEP | Predicted GO |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Predicted GO |
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | Predicted GO |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
| MF | GO:0005215 | transporter activity | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| BP | GO:0006020 | inositol metabolic process | IEP | Predicted GO |
| BP | GO:0006021 | inositol biosynthetic process | IEP | Predicted GO |
| BP | GO:0006595 | polyamine metabolic process | IEP | Predicted GO |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006597 | spermine biosynthetic process | IEP | Predicted GO |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
| BP | GO:0008215 | spermine metabolic process | IEP | Predicted GO |
| BP | GO:0008216 | spermidine metabolic process | IEP | Predicted GO |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | Predicted GO |
| MF | GO:0015267 | channel activity | IEP | Predicted GO |
| CC | GO:0016020 | membrane | IEP | Predicted GO |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Predicted GO |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0030151 | molybdenum ion binding | IEP | Predicted GO |
| MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
| BP | GO:0042126 | nitrate metabolic process | IEP | Predicted GO |
| BP | GO:0042128 | nitrate assimilation | IEP | Predicted GO |
| BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
| BP | GO:0097164 | ammonium ion metabolic process | IEP | Predicted GO |
| BP | GO:2001057 | reactive nitrogen species metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031322 | Shikimate/glucono_kinase | 102 | 254 |
| No external refs found! |