GRMZM2G071484

Description : plant U-box 22

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G071484
Cluster	HCCA clusters: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
416356	No alias	plant U-box 24	0.02	Orthogroups_2024-Update
At1g49780	No alias	U-box domain-containing protein 26...	0.03	Orthogroups_2024-Update
At1g66160	No alias	U-box domain-containing protein 20...	0.03	Orthogroups_2024-Update
Brara.B01640.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Brara.C01808.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Brara.D02179.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Brara.E02265.1	No alias	U-Box-group-III E3 ubiquitin ligase	0.05	Orthogroups_2024-Update
Glyma.07G106000	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G172100	No alias	CYS, MET, PRO, and GLY protein 1	0.02	Orthogroups_2024-Update
Glyma.12G095100	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
Glyma.18G042100	No alias	ARM repeat superfamily protein	0.05	Orthogroups_2024-Update
HORVU2Hr1G076470.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os03g13740	No alias	immediate-early fungal elicitor protein CMPG1, putative,...	0.04	Orthogroups_2024-Update
LOC_Os04g34030	No alias	U-box domain-containing protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g35680	No alias	U-box domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10432179g0010	No alias	(at3g52450 : 121.0) Encodes a cytoplasmically localized...	0.02	Orthogroups_2024-Update
MA_410546g0010	No alias	(at2g35930 : 239.0) Encodes a cytoplasmically localized...	0.02	Orthogroups_2024-Update
MA_415393g0010	No alias	(at3g19380 : 146.0) plant U-box 25 (PUB25); FUNCTIONS...	0.05	Orthogroups_2024-Update
MA_83739g0020	No alias	(at1g49780 : 403.0) plant U-box 26 (PUB26); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00022617-RA	No alias	(at3g52450 : 247.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00026834-RA	No alias	(at3g19380 : 258.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
PSME_00043995-RA	No alias	(at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS...	0.04	Orthogroups_2024-Update
PSME_00048709-RA	No alias	(at2g35930 : 183.0) Encodes a cytoplasmically localized...	0.02	Orthogroups_2024-Update
PSME_00049378-RA	No alias	(at3g19380 : 185.0) plant U-box 25 (PUB25); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00049469-RA	No alias	(at2g35930 : 281.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00054803-RA	No alias	(at3g52450 : 283.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00056516-RA	No alias	(at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
PSME_00056761-RA	No alias	(at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
Potri.001G216300	No alias	plant U-box 24	0.04	Orthogroups_2024-Update
Potri.002G070500	No alias	plant U-box 29	0.02	Orthogroups_2024-Update
Potri.015G031000	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G135000	No alias	ARM repeat superfamily protein	0.02	Orthogroups_2024-Update
Pp1s67_203V6	No alias	MLD14.11; U-box domain-containing protein [Arabidopsis thaliana]	0.03	Orthogroups_2024-Update
Seita.1G186200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G392700.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Seita.7G095100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.7G104100.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Seita.9G474100.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Sobic.001G441100.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Sobic.004G169200.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Sobic.004G169900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G101150.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Sobic.010G102000.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Solyc01g080920	No alias	LOW QUALITY:U-box domain-containing protein (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc06g074140	No alias	LOW QUALITY:U-box domain-containing family protein (AHRD...	0.02	Orthogroups_2024-Update
Solyc11g006030	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Predicted GO
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Predicted GO
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
MF	GO:0008066	glutamate receptor activity	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
MF	GO:0022824	transmitter-gated ion channel activity	IEP	Predicted GO
MF	GO:0022834	ligand-gated channel activity	IEP	Predicted GO
MF	GO:0022835	transmitter-gated channel activity	IEP	Predicted GO
MF	GO:0030594	neurotransmitter receptor activity	IEP	Predicted GO
MF	GO:0038023	signaling receptor activity	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predicted GO
MF	GO:0060089	molecular transducer activity	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	14	88

External Links

No external refs found!

GRMZM2G071484

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation