1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g21540

At1g21540


Description : Probable acyl-activating enzyme 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPK6]


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g21540
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G013783 No alias acyl-activating enzyme 7 0.03 Orthogroups_2024-Update
Pp1s7_313V6 No alias amp dependent 0.02 Orthogroups_2024-Update
Solyc03g032210 No alias AMP-dependent synthetase and ligase family protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 457 536
IPR000873 AMP-dep_Synth/Lig 22 448
No external refs found!