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  5. GRMZM2G073567

GRMZM2G073567


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0001263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G073567
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
A4A49_21819 No alias serinearginine-rich splicing factor sr45a 0.03 Orthogroups_2024-Update
At1g07350 No alias Serine/arginine-rich splicing factor SR45a... 0.04 Orthogroups_2024-Update
Bradi3g34860 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Glyma.18G067300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Orthogroups_2024-Update
HORVU4Hr1G060940.5 No alias splicing factor *(SR45a) 0.03 Orthogroups_2024-Update
LOC_Os03g15890 No alias RNA recognition motif containing protein, expressed 0.05 Orthogroups_2024-Update
MA_89416g0010 No alias (at1g07350 : 117.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
Seita.9G457400.1 No alias splicing factor *(SR45a) 0.04 Orthogroups_2024-Update
Sobic.001G426800.1 No alias splicing factor *(SR45a) 0.04 Orthogroups_2024-Update
Sopen06g033060 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
evm.model.tig00020553.146 No alias (at1g07350 : 106.0) RNA-binding (RRM/RBD/RNP motifs)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 42 111
No external refs found!