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At1g21700


Description : SWI/SNF complex subunit SWI3C [Source:UniProtKB/Swiss-Prot;Acc:Q9XI07]


Gene families : OG_42_0001732 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g21700
Cluster HCCA clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Bradi4g41230 No alias SWITCH/sucrose nonfermenting 3C 0.03 Orthogroups_2024-Update
Cre08.g364050 No alias SWITCH/sucrose nonfermenting 3C 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032451 SMARCC_C 585 658
IPR001005 SANT/Myb 402 444
IPR007526 SWIRM 180 265
No external refs found!