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  5. At1g21850

At1g21850


Description : Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]


Gene families : OG_42_0000592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g21850
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
At1g21860 No alias SKU5 similar 7 [Source:UniProtKB/TrEMBL;Acc:Q9SFF1] 0.04 Orthogroups_2024-Update
Bradi1g26470 No alias SKU5 similar 5 0.03 Orthogroups_2024-Update
Glyma.06G019800 No alias SKU5 similar 5 0.03 Orthogroups_2024-Update
Glyma.17G261500 No alias SKU5 similar 5 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 161 296
IPR011706 Cu-oxidase_2 377 513
IPR011707 Cu-oxidase_3 35 148
No external refs found!