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  5. At1g22020

At1g22020


Description : Serine hydroxymethyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM59]


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g22020
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
A4A49_06356 No alias serine hydroxymethyltransferase 3, chloroplastic 0.04 Orthogroups_2024-Update
Bradi4g08097 No alias serine hydroxymethyltransferase 4 0.02 Orthogroups_2024-Update
Brara.D00684.1 No alias serine hydroxymethyltransferase *(SHM) & EC_2.1... 0.04 Orthogroups_2024-Update
PSME_00004358-RA No alias (at4g32520 : 524.0) Encodes a serine... 0.02 Orthogroups_2024-Update
Potri.002G109200 No alias serine hydroxymethyltransferase 2 0.03 Orthogroups_2024-Update
Solyc01g104000 No alias Serine hydroxymethyltransferase (AHRD V3.3 *** K4B1X5_SOLLC) 0.03 Orthogroups_2024-Update
Sopen00g004190 No alias Serine hydroxymethyltransferase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 142 546
No external refs found!