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  5. GRMZM2G078090

GRMZM2G078090


Description : Function unknown


Gene families : OG_42_0002603 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G078090
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
439353 No alias Function unknown 0.02 Orthogroups_2024-Update
A4A49_40066 No alias hypothetical protein 0.05 Orthogroups_2024-Update
Bradi4g01320 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.J02706.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Glyma.03G203600 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.10G083500 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU5Hr1G092510.8 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00067_0220 kfl00067_0220_v1.1 (at5g04860 : 231.0) unknown protein; BEST Arabidopsis... 0.01 Orthogroups_2024-Update
LOC_Os03g44670 No alias expressed protein 0.06 Orthogroups_2024-Update
Potri.008G015700 No alias Function unknown 0.03 Orthogroups_2024-Update
Pp1s51_52V6 No alias F26K24.5; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.3G389000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G154500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G153200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G175900.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sopen04g004910 No alias N-terminal C2 in EEIG1 and EHBP1 proteins 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR019448 NT-C2 106 198
No external refs found!