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  5. GRMZM2G078781

GRMZM2G078781


Description : cyclic nucleotide-gated cation channel 4


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G078781
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
At1g15990 No alias Putative cyclic nucleotide-gated ion channel 7... 0.02 Orthogroups_2024-Update
At2g24610 No alias cyclic nucleotide-gated channel 14 [Source:TAIR;Acc:AT2G24610] 0.02 Orthogroups_2024-Update
At2g46450 No alias Probable cyclic nucleotide-gated ion channel 12... 0.03 Orthogroups_2024-Update
At5g53130 No alias Cyclic nucleotide-gated ion channel 1... 0.04 Orthogroups_2024-Update
Glyma.09G168400 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Glyma.10G053900 No alias cyclic nucleotide-gated channel 15 0.03 Orthogroups_2024-Update
HORVU6Hr1G058880.14 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
LOC_Os03g55100 No alias cyclic nucleotide-gated ion channel 2, putative, expressed 0.03 Orthogroups_2024-Update
Potri.017G089800 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Pp1s204_120V6 No alias MKP6.28; cyclic nucleotide-binding transporter 1 / CNBT1... 0.02 Orthogroups_2024-Update
Seita.3G188100.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Sobic.004G221000.2 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 161 396
IPR000595 cNMP-bd_dom 491 578
No external refs found!